#data

Recent Posts

• Design of a mucin-selective protease for targeted degradation of cancer-associated mucins

  Feb 28, 2026 — The rubber hits the road on ColabFold! I hope that's rubber I'm smelling — although it may be the computer. A replication attempt of a protein fold figure in K. Pedram et al (2023).

  • #bio
  • #data
  • #python
  • #annotations

• An Annotated Guide to Hobbyist Protein Folding

  Feb 25, 2026 — Amaze (or bore) your friends and family by picking up on a hot new hobby that's all the rage — protein folding! An annotated starter to the 2021 paper "ColabFold - Making protein folding accessible to all"

  • #bio
  • #data
  • #python
  • #homelab
  • #annotations

• APL: Pattern 3; City Country Fingers

  Feb 07, 2026 — City, with natural stripes — or nature, with city stripes? Annotations for A Pattern Language, and tracking public opinion of where Americans want to live over the past 50 years.

  • #a-pattern-language
  • #the-neighborhood
  • #markets
  • #data

• Privacy Policy

  Feb 04, 2026 — When it comes to collecting data, there's a fine line between making a good site and making an invasive product. To make this site more useful, I want to collect enough data to improve, but never enough to undermine anybody's privacy.

  • #data
  • #site
  • #essays

• Ants in the Neighborhood

  Feb 02, 2026 — Is Jane Street run by soccer-loving ants? Inconclusive. We *can* conclude that they're fans of Markov Chains, though — an invaluable tool for understanding complex data structures.

  • #data
  • #the-neighborhood
  • #a-pattern-language