Occasionally, the notes on this site will be annotative notes on other folks’ works that I find interesting. Whenever possible, I’ll make these annotations public, especially when the sources are publicly available.
— Many an engineer has heard tales of Valve's "flat" organization structure — what is fact, what is fiction, and how does it actually work? An annotated copy of the 2012 First Edition of Valve's Employee Handbook.
— Our lives are all dominated by a little graph in our hearts — and sometimes, that graph gets wacky. A review of Dietrich Bonhoeffer's "Theory of Stupidity", part of his larger ~1943-1945 work "Letters and Papers from Prison."
— The rubber hits the road on ColabFold! I hope that's rubber I'm smelling — although it may be the computer. A replication attempt of a protein fold figure in K. Pedram et al (2023).
— Amaze (or bore) your friends and family by picking up on a hot new hobby that's all the rage — protein folding! An annotated starter to the 2021 paper "ColabFold - Making protein folding accessible to all"
— Do humans have a role in software development anymore? Absolutely — but we need to rethink what it means to program. An modern review of Peter Naur's 1985 essay "Programming as Theory Building"
— Urban development has the high ground over agricultural and ecological preservation — and it should! *A Pattern Language* annotations on Pattern 4: Agricultural Valleys
— How dense is too dense? How sparse is too sparse? Annotations for A Pattern Language's proposals for the density of metro-adjacent country streets for agriculture, recreation, and preservation.
— Home isn't where the heart is — it's a single node on a very, very large graph. Annotations for the "Independent Regions" pattern of *A Pattern Language*.
— How close is too close? How far is too far? *A Pattern Language* annotations related to the statistical, economic, and ecologic concerns in balancing how dense human habitats ought to be.
— City, with natural stripes — or nature, with city stripes? Annotations for A Pattern Language, and tracking public opinion of where Americans want to live over the past 50 years.
— Is Jane Street run by soccer-loving ants? Inconclusive. We *can* conclude that they're fans of Markov Chains, though — an invaluable tool for understanding complex data structures.
— The beginning of a topological review of the 1977 urban design and architecture reference book A Pattern Language, and a journey to understand Earth's greatest graph: the Earth, itself.
— Annotations for Greiner's 1972 paper "Evolution and Revolution as Organizations Grow", about the structural composition of organizations at different sizes and requirements.
— Notes from learning Event Storming for domain-driven design. Thoughts on phases,
color-coded chaos, and how to transition from fast pitches to full products.
— An engineer-focused primer on the mechanisms that drive Large Language Models. Basics on how we got here,
how they work, and how to use them without feeling an apocalyptic dread.